Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839014.1_cds_XP_016507167.1_20318
CDS Infomation

[gene=LOC107824877] [db_xref=GeneID:107824877] [protein=SWI/SNF complex subunit SWI3A-like isoform X2] [protein_id=XP_016507167.1] [location=complement(join(74934..75131,75400..75557,75718..75767,76219..76376,76697..77176,78010..78611,78702..78789))] [gbkey=CDS]
Sequence

ATGGATACATCTCGCTCCCAAAACCCTAATCACCTAAAACCCTCCGACGAGCCTGACCAC
GATCTTTATACAATCCCTAGTTACACAAGTTGGTTTTCTTGGCAAAGCATACACGAAGTA
GAGAGGCTATCATTGCGAGAATTCTTCGATGGCAGTTCAATTACAAGGACGCCCAGGATT
TACAAAGAGTACAGGGATTTCATTATTACCTCCTACCGTGAGGATCCGACCCGAAAACTC
ACTTTCACGGAGGTCCGGAAGTCATTAGTGGGCGATATAAGCGTGCTCCACAAGGTATTT
ACTTTTCTAGAGAAGTGGGGTTTGATCAATTTTGACCCTAGTAATACTGAAATAGCGCCG
GCGGTTATTGGTGCTGCGGAGGAAGAGGATAATAAGGAGGATGAGAAGTGGAGGATTAGG
GTTGAAGAAGGGGCCCCACATGGGGTTAGGGTTGTGGCAGCTCCTCATTCTTTGAAGCCC
CTTGTGCCGGTTCCGTCTCCGGTGGTCGTCGGGGACGGAGGTGGTGGCAGGGGGAGGAGT
GGTGATGTGGCAGATAGTGTAGTAAAGGCATCACCTTTGGCGTCCTATTCGGATGTTTAT
GGGAAGTCGATGGATCCACAAAGGAAGGAAAGTGTAGTGTGTGATAGTTGCAAAGAACAG
TGTGCTTCGGGTCATTATGAGTACATCAAGAATGCAAGCTATAATTTATGCGAGAAGTGC
TTTAAAAGTGGTAATTATGACAAGGACAAATTGGCAGATGAGTTCAAGTTGATGGATGGT
GCGAACTCCAAGGCTGTCTGGACTGAAGCAGAAACCTTACTCCTATTAGAATCTGTATTG
AAGCATGGTGATGACTGGGATCTTGTTGCTCAAAATGTCAAAACAAAGAGTAAACTGGAT
TGTATCTCAAAGCTTATACAGTTGCCTTTCGGGGATCTTATGCTTGGTTCTATTCACAAA
AAGATTAAACATTTGGACACAAATGGTGAGGTAAGCAGCGTGGATCAAGCTCAAGGTGCA
ATAAGTGAGTCTGGAGAAACTCCTGGAAATCAATCTCATGAGCAGAACCAGGAGCATCAA
CAGAATGGAGATGGTGAAGACAAAACCCCTCCTCTCAAGAAAATACGCAGGGCTCCAATT
GCAGAAGCCAGTAGTTTCCTGATGAAACAGGTGGCTCGGATCTCTGGTGCTGTTGGTCCA
CATATCACAGCATCTGCAGCTGAGGCTGCTGTTACCGCCCTTTGCTACGAGAACCAGTGT
TCAACGGACATTTTTGATGAAGATGATGATGGATTGGGATCAATTGCTGATATCAGTGAG
ACAGAGAGAGGGAGTCAAGATGAAAGTGCTAAAGGGGAGGAAAAGTCTGCCAGCTCAGAG
GTGGCAGTCTCCCAAAGGAATACTATACCTCTAACTTTACGCATGAGGGCCGCAACTGCA
ACTGCTCTCGGCGCTGCTGCTGCTCATGCCAAATTGTTGGCTGATCAGGAAGAGAGAGAA
GTAGAATATCAGGTTTCTACTTTAGTCGAAGCACAGGTGAAGAAGTTGCAACGTAAAATG
AAACATGTCGAAGCTCTGAACCTGATGATGGAGAAGCAACATGCCCAAATGAAGGATTTA
GAAGATTCTTTAGTTACGGAAAGAATGGACATCTTGCAGAAGATATTTAGCGCGGGGGTA
TCTAGATGGAGTGATCATGCTTCTGCCAAATCTCAAAGTAGCAGCATAGCTTGA

Peptide Sequence

PEP ID

XP_016507167.1
PEP Infomation

PREDICTED: SWI/SNF complex subunit SWI3A-like isoform X2 [Nicotiana tabacum]
Sequence

MDTSRSQNPNHLKPSDEPDHDLYTIPSYTSWFSWQSIHEVERLSLREFFDGSSITRTPRI
YKEYRDFIITSYREDPTRKLTFTEVRKSLVGDISVLHKVFTFLEKWGLINFDPSNTEIAP
AVIGAAEEEDNKEDEKWRIRVEEGAPHGVRVVAAPHSLKPLVPVPSPVVVGDGGGGRGRS
GDVADSVVKASPLASYSDVYGKSMDPQRKESVVCDSCKEQCASGHYEYIKNASYNLCEKC
FKSGNYDKDKLADEFKLMDGANSKAVWTEAETLLLLESVLKHGDDWDLVAQNVKTKSKLD
CISKLIQLPFGDLMLGSIHKKIKHLDTNGEVSSVDQAQGAISESGETPGNQSHEQNQEHQ
QNGDGEDKTPPLKKIRRAPIAEASSFLMKQVARISGAVGPHITASAAEAAVTALCYENQC
STDIFDEDDDGLGSIADISETERGSQDESAKGEEKSASSEVAVSQRNTIPLTLRMRAATA
TALGAAAAHAKLLADQEEREVEYQVSTLVEAQVKKLQRKMKHVEALNLMMEKQHAQMKDL
EDSLVTERMDILQKIFSAGVSRWSDHASAKSQSSSIA

Transcript Sequence

Gene sequence data has not been registered.